Models for 16s rRNA gene


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5 Models
Gene Region Forward Forward seq Reverse Reverse Seq Length DB Version Download
16s rRNA V4 515F GTGYCAGCMGCCGCGGTAA 806R GGACTACNVGGGTWTCTAAT ~291 Silva 132 ||
16s rRNA V4-V5 515F GTGYCAGCMGCCGCGGTAA 926R CCGYCAATTCMTTTRAGTTT ~411 Silva 132 ||
16s rRNA V3-V4 341F CCTACGGGNGGCWGCAG 805R GACTACHVGGGTATCTAATCC ~464 Silva 132 ||
16s rRNA V1-V2-V3 27F AGAGTTTGATCMTGGCTCAG 534R WTTACCGCGGCTGCTGG ~507 Silva 132 ||
16s rRNA V1-V2 28F GAGTTTGATCNTGGCTCAG 388R TGCTGCCTCCCGTAGGAGT ~350 Silva 132 ||
16s rRNA V3 341F CCTACGGGAGGCAGCAG 518R ATTACCGCGGCTGCTGG ~177 Silva 132 ||
ITS ITS1 ITS1F TCCGTAGGTGAACCTGCGG ITS2R GACACTCAAACAGGTGTACCTT Unite ||
ITS ITS2 ITS3F CACATCGATGAAGAACACAGT ITS4R TCAACAGACTTGTACATGGTCC Unite ||